Our Nature Communciations paper – ice-like phonons in liquid water

Our paper, “The hydrogen-bond network of water supports propagating optical phonon-like modes” was published on January 4th in Nature Communications (full open access pdf). A press release about our work has been issued by the Stony Brook Newsroom and picked up by news aggregator Phys.org.

Our work shows that propagating vibrations or phonons can exist in water, just as in ice. The work analyzes both experimental data and the results of extensive molecular dynamics simulations performed with a rigid model (TIP4P/eps), a flexible model (TIP4P/2005f), and an ab-initio based polarizable model (TTM3F). Many of these simulations were performed on the new supercomputing cluster at Stony Brook’s Institute for Advanced Computational Science.

Liquid-state phonons
Phonons are usually considered to be solely a solid-state phenomena. In liquids, atoms or molecules are disordered and diffuse around, and there is no underlying order or crystal structure, so naively liquids should not be able to support coherent phonons. Water is special, however, because it contains a hydrogen bond network. We argue phonons can propagate through this H-bond network, just as they propagate through the H-bond network of ice.

Unlike in ice, however, hydrogen bonds in water are constantly being broken and reformed, so the phonons only last for at most one trillionth of a second (1 ps). However, over this short time we show they can travel over surprisingly long distances of 2+ nanometers. We verify this range of propagation by breaking the transverse and longitudinal dielectric spectra into distance-dependent components:

dist-dependence

Distance dependence of the longitudinal (top) and transverse (bottom) dielectric susceptibilities.

To make this plot we considered spheres of various sizes around each molecule and analyzed the spectra using those spheres. When the radius of the sphere (R) is zero, then you are only considering single molecules separately and not considering how the dipole moments of different molecules add together. When you start increasing R, then you start considering adding together the dipole moments of molecules within a sphere around each molecule. Molecules that have dipole moments pointing in the same direction are said to be positively correlated and such correlation increases the dielectric response. Molecules that point in opposite directions are anti-correlated and decrease the response. At some far enough distance, the molecules become uncorrelated. When is larger than that distance, the spectra no longer changes. The largest accesible in our 4 nm box would be along the diagonal, which is R = 3.46.  Surprisingly, in the librational band (400-1000 1/cm), the spectra does not stop changing until is greater than 2-3 nanometers.  To put that in perspective, a 2 nanometer sphere contains over 1100 molecules! The picture we arrive at is that of an extended quasi-tetrahedral (ice-like) hydrogen bond network that exists on picosecond timescales and allows for phonons to propagate through it.

I also did a distance decomposed infrared spectra (unpublished), which shows the essentially the same information as the transverse dielectric susceptibility:

dist_decomposed_IR_spectra

Distance decomposed Infrared spectrum from a simulation of TIP4P/2005f water in a 4nm box.

We focused specifically on optical phonons, which correspond to charge density waves that can interact with electromagnetic waves. In the case of ice, optical phonons cause well documented peaks in infrared and polarized Raman spectra. Similar absorption peaks are also found in the infrared and depolarized Raman spectra of liquid water.

ncomms10193-f1

Longitudinal (magenta) and transverse (cyan) dielectric susceptibilities of ice and water derived from experimental data. The lines are positioned at the peak maxima and indicate LO-TO splitting.

By comparing the experimental Raman, dielectric, and infrared spectra we show that peaks the librational and OH-stretch parts of the Raman & infrared spectra correspond to two different types of phonons, longitudinal and transverse. We identify longitudinal modes by looking a the longitudinal dielectric susceptibility.

The shifting of the position of the longitudinal and transverse peaks with temperature can be related to important structural changes in the hydrogen bond network, providing a new window into how water’s structure changes with temperature.

Relation to previous work
Our work builds on previous work on the nonlocal (k-dependent) susceptibility of water. More importantly, though, our findings challenge older ideas about water’s dynamics that characterized spectral peaks being due to the vibrational motions of at most a few molecules. In particular we reject previous interpretations of the librational band in Raman and IR spectra that assigned the three librational peaks to the librational motions of single molecules. Similarly, attempts to split the OH-stretching band cleanly into peaks from 2-Hbonded, 3-Hbonded, and 4H-bonded molecules are also called into question.

There is obviously some merit in understanding the spectra of bulk water by first studying the spectra of clusters of increasing size (Saykally, 2001). Under this approach it is usually implicitly assumed that when large clusters start to mimic the response of bulk water the size of such clusters indicates the spatial extent of vibrational excitations in the bulk. This is a questionable assumption. In some cases, particular clusters have been singled out as being particularly relevant to bulk water dynamics, in particular the cyclic pentamer (Bosma 1993). Our work contradicts the view that dynamics are confined to small clusters such as pentamers.

Relevance to the water structure debate
    see my post An introduction to the water structure problem
We hope that our work can provide a new experimental window into water structure though the analysis of LO-TO splitting in the dielectric susceptibilities, as derived from experimental complex index of refraction data (n and k). From solid state physics theory it is understood that LO-TO splitting arises from long-range Coulomb or dipole-dipole interactions. In crystals, very long wavelength longitudinal optical phonons create a macroscopic electric field which increases their frequency relative to their transverse counterparts. Furthermore, as we discuss in our work, the degree of LO-TO splitting can in principle be related to structure. Intriguingly, we find an unexpected increase in the LO-TO splitting of the librational modes as temperature is increased.

Further implications
In biophysics, the results indicate that a new class of water-mediated protein-protein interactions may be possible. Recent work has shown dynamical coupling between proteins and surrounding water molecules (Ebbinghaus 2007), but the physical extent of this coupling is not very well understood. Currently this coupling is only being studied at low frequencies (< 33 cm 1/cm) (<1 THz), but our work indicates such coupling could also exist at much higher frequencies.

Additionally, by comparing several different simulation techniques, the we find that the non-polarizable water models fail to capture the optical phonon-like modes at the OH-stretch frequency. This compliments our previous work where we showed other ways that polarizable models are more accurate than the more often used non-polarizable models.

Note: this largely a cross-post from a piece I wrote on the MVFS group blog

3 Comments

Filed under non-technical, research, Uncategorized

3 Responses to Our Nature Communciations paper – ice-like phonons in liquid water

  1. James McGinn

    I skimmed this article (no time) and I haven’t read the paper that it references. But I bet that your ability to conduct phonons was greater at higher temps. That is because there is more hard water (ice, low-density anomalies) in warm water than there is in cool (above 4 degrees) water. Think about that. There is more ice in warm water than there is in cool water.
    (BTW, low-density anomalies and ice are the same thing.)
    Here is another way to look at it. Ice and surface tension are the same thing. There is more surface area in warm, turbulent water than there is in cool, calm water. Since there is more surface area, there is more surface tension and since surface tension and ice are the same thing there is more ice in warm, turbulent water than there is in cool, calm water.
    Now consider this. Since hard water (ice) is a better conductor of energy than liquid water, warmer water provides more pathways for energy conductivity than cool calm water. And once the pathwa is established . . . Now think about that in terms of Mpemba.

  2. James McGinn

    “From solid state physics theory it is understood that LO-TO splitting arises from long-range Coulomb or dipole-dipole interactions. In crystals, very long wavelength longitudinal optical phonons create a macroscopic electric field which increases their frequency relative to their transverse counterparts. Furthermore, as we discuss in our work, the degree of LO-TO splitting can in principle be related to structure. Intriguingly, we find an unexpected increase in the LO-TO splitting of the librational modes as temperature is increased.”

    One last thing. The increase in the, “LO-TO splitting of the librational modes as temperature is increased” is unexpected in your paradigm. It is predicted in mine. (Disclaimer: I say this even though I highly disagree with the notion that the phenomena associated with “LO-TO splitting” is correctly attributed to, “long-range Coulomb interactions,” [a notion I find dubious].)

  3. Sergio Falah

    James McGinn is a jokester, (also known as Claudius Denk) wrote;

    1. WHAT GOES UP: Storm Theory: What meteorologists believe but won’t debate, discuss, or even doubt (Solving Tornadoes: Hacking the Atmosphere Book 1)

    2. Vortex Phase: The Discovery of the Spin That Underlies the Twist: A Simple Solution to Large, Violent Tornadoes (Solving Tornadoes: Hacking the Atmosphere Book 2)

    3.Wind and Paranoia: What Meteorologist Won’t Tell You and What You Wouldn’t Believe if They Did (Solving Tornadoes: Hacking the Atmosphere Book 1) (English Edition)
    by Claudius Denk

    4.Solving Tornadoes: What Meteorologist Won’t Tell You and What You Wouldn’t Believe if They Did (Hacking the Atmosphere Book 1)
    by Jim McGinn

    all 4 are the same book, 57 pages of unreadable non-science, he had to change the name because of bad reviews, two posted below;

    1
    1.0 out of 5 stars insane rambling
    By K. Parker on July 3, 2014

    The author believes that elementary concepts, which have been taught to and understood by first year Chemistry and Physics students for many decades, are some kind of meteorological conspiracy. The author also does not understand the very basic physics that drive convective updrafts (the positive buoyancy due to warm temperature anomalies that result from latent heat release). Instead, apparently based largely on reading websites, he proposes a mechanism that makes no physical sense and is totally unobserved and unobservable. This text violates even basic tenets of logic. Totally without merit.

    1.0 out of 5 starsWaste of time, a non-funny joke
    By hunter on July 16, 2014

    This book misleads the reader on basic physical concepts like density, the basics of weather dynamics, and offers a silly idea that confuses metaphors about how the jet stream operates with reality. It solves nothing but does offer a way to waste time and money buying and reading it. This book is an example of the risks posed in the age of inexpensive self publishing.

    see also his blog.
    https://sites.google.com/site/solvingtornadoes/previous-discussions

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